STRINGSTRING
R2601_26741 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26741" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26741Uncharacterized protein (83 aa)    
Predicted Functional Partners:
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (431 aa)
              0.859
R2601_26846
Uncharacterized protein (162 aa)
   
          0.771
R2601_26386
Uncharacterized protein (87 aa)
   
          0.762
R2601_24514
Acyl carrier protein, putative (80 aa)
   
          0.736
R2601_05588
Uncharacterized protein (104 aa)
   
          0.713
R2601_09083
Uncharacterized protein (165 aa)
   
          0.712
R2601_17629
Uncharacterized protein (109 aa)
   
          0.701
R2601_19317
Dihydroneopterin aldolase, putative (303 aa)
   
          0.697
R2601_17599
Uncharacterized protein (225 aa)
   
          0.669
R2601_22372
Uncharacterized protein (99 aa)
   
          0.662
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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