STRINGSTRING
R2601_26751 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26751" - YbgT protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26751YbgT protein (45 aa)    
Predicted Functional Partners:
R2601_26756
Cytochrome d ubiquinol oxidase, subunit II (387 aa)
 
          0.960
R2601_26761
Cytochrome d oxidase (537 aa)
 
          0.954
R2601_26766
ABC transporter, nucleotide binding/ATPase protein (521 aa)
 
          0.899
R2601_26771
Uncharacterized protein (547 aa)
 
          0.886
R2601_26746
Probable threonine dehydratase protein (338 aa)
              0.440
R2601_24190
Cytochrome d ubiquinol oxidase, subunit II (338 aa)
              0.424
R2601_24185
Quinol oxidase subunit I QxtA (475 aa)
              0.424
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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