STRINGSTRING
R2601_26861 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26861" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26861Uncharacterized protein (187 aa)    
Predicted Functional Partners:
R2601_26841
Uncharacterized protein (192 aa)
 
          0.794
R2601_26846
Uncharacterized protein (162 aa)
 
          0.783
R2601_13915
Uncharacterized protein (182 aa)
   
          0.766
R2601_26866
Uncharacterized protein (39 aa)
              0.734
R2601_13214
Uncharacterized protein (169 aa)
   
          0.724
R2601_26856
FeS assembly ATPase SufC (251 aa)
              0.723
R2601_26851
FeS assembly protein SufD (425 aa)
              0.723
R2601_26836
Cysteine desulfurase ; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (406 aa)
              0.721
R2601_26346
Uncharacterized protein (338 aa)
   
          0.710
R2601_11274
Uncharacterized protein (223 aa)
   
          0.692
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]