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ate protein (Pelagibaca bermudensis) - STRING interaction network
"ate" - Putative arginyl-tRNA--protein transferase in Pelagibaca bermudensis
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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atePutative arginyl-tRNA--protein transferase ; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (270 aa)    
Predicted Functional Partners:
aat
Phenyalanyltransferase ; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine (212 aa)
 
          0.563
R2601_12675
Dihydroorotate dehydrogenase (quinone) ; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (352 aa)
 
          0.530
R2601_27061
RDD family protein (149 aa)
              0.512
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
              0.451
infA
Translation initiation factor IF-1 ; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex (72 aa)
              0.451
R2601_09215
Thioredoxin reductase (334 aa)
              0.451
R2601_16695
FtsK/SpoIIIE family protein (1137 aa)
              0.450
R2601_08291
TrkA domain protein (592 aa)
              0.450
R2601_00845
Probable sodium/sulphate symporter (593 aa)
              0.450
R2601_14605
Chemotaxis protein MotB (277 aa)
              0.447
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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