STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ40741.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (368 aa)    
Predicted Functional Partners:
ydjI
Antifreeze protein, type I; [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.976
EDZ42930.1
Conserved hypothetical protein; [R] COG1512 Beta-propeller domains of methanol dehydrogenase type.
  
  
 0.856
EDZ40838.1
Conserved hypothetical protein.
  
  
 0.856
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.817
EDZ43473.1
Nitroreductase family protein; [H] COG0212 5-formyltetrahydrofolate cyclo-ligase.
       0.793
EDZ41150.1
Tellurite resistance protein; [P] COG3853 Uncharacterized protein involved in tellurite resistance; Belongs to the TelA family.
 
    0.769
EDZ43479.1
Conserved hypothetical protein.
 
     0.767
EDZ41967.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.400
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.