STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41120.1[M] COG0668 Small-conductance mechanosensitive channel. (106 aa)    
Predicted Functional Partners:
EDZ41283.1
MscS Mechanosensitive ion channel.
     0.946
RB2083_90
Hypothetical protein.
       0.651
EDZ40948.1
[M] COG0668 Small-conductance mechanosensitive channel.
 
   
 0.582
EDZ41166.1
Conserved hypothetical protein TIGR00427; [U] COG2095 Multiple antibiotic transporter.
  
    0.580
EDZ42768.1
Aerobic respiration control sensor protein ArcB, putative; [T] COG0642 Signal transduction histidine kinase.
     
 0.512
EDZ43960.1
Hypothetical protein.
       0.458
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.