Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ40972.1 | EDZ41471.1 | RB2083_486 | RB2083_985 | Putative ammonia monooxygenase; [K] COG2002 Regulators of stationary/sporulation gene expression. | Hypothetical protein. | 0.402 |
| EDZ40972.1 | EDZ42104.1 | RB2083_486 | RB2083_1619 | Putative ammonia monooxygenase; [K] COG2002 Regulators of stationary/sporulation gene expression. | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | 0.470 |
| EDZ41471.1 | EDZ40972.1 | RB2083_985 | RB2083_486 | Hypothetical protein. | Putative ammonia monooxygenase; [K] COG2002 Regulators of stationary/sporulation gene expression. | 0.402 |
| EDZ41471.1 | EDZ42104.1 | RB2083_985 | RB2083_1619 | Hypothetical protein. | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | 0.645 |
| EDZ41471.1 | EDZ42836.1 | RB2083_985 | RB2083_2351 | Hypothetical protein. | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.414 |
| EDZ41471.1 | EDZ43464.1 | RB2083_985 | RB2083_2979 | Hypothetical protein. | [P] COG1275 Tellurite resistance protein and related permeases. | 0.554 |
| EDZ41471.1 | guaB | RB2083_985 | RB2083_114 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.414 |
| EDZ42104.1 | EDZ40972.1 | RB2083_1619 | RB2083_486 | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | Putative ammonia monooxygenase; [K] COG2002 Regulators of stationary/sporulation gene expression. | 0.470 |
| EDZ42104.1 | EDZ41471.1 | RB2083_1619 | RB2083_985 | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | Hypothetical protein. | 0.645 |
| EDZ42104.1 | EDZ42836.1 | RB2083_1619 | RB2083_2351 | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.418 |
| EDZ42104.1 | EDZ43464.1 | RB2083_1619 | RB2083_2979 | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | [P] COG1275 Tellurite resistance protein and related permeases. | 0.470 |
| EDZ42104.1 | guaB | RB2083_1619 | RB2083_114 | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.480 |
| EDZ42836.1 | EDZ41471.1 | RB2083_2351 | RB2083_985 | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Hypothetical protein. | 0.414 |
| EDZ42836.1 | EDZ42104.1 | RB2083_2351 | RB2083_1619 | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | 0.418 |
| EDZ42836.1 | EDZ43464.1 | RB2083_2351 | RB2083_2979 | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | [P] COG1275 Tellurite resistance protein and related permeases. | 0.565 |
| EDZ42836.1 | guaB | RB2083_2351 | RB2083_114 | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.919 |
| EDZ43464.1 | EDZ41471.1 | RB2083_2979 | RB2083_985 | [P] COG1275 Tellurite resistance protein and related permeases. | Hypothetical protein. | 0.554 |
| EDZ43464.1 | EDZ42104.1 | RB2083_2979 | RB2083_1619 | [P] COG1275 Tellurite resistance protein and related permeases. | Ferredoxin; [R] COG3894 Uncharacterized metal-binding protein. | 0.470 |
| EDZ43464.1 | EDZ42836.1 | RB2083_2979 | RB2083_2351 | [P] COG1275 Tellurite resistance protein and related permeases. | Fmu; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.565 |
| EDZ43464.1 | guaB | RB2083_2979 | RB2083_114 | [P] COG1275 Tellurite resistance protein and related permeases. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.631 |
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