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RB2654_00160 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_00160" - Pca operon transcriptional activator PcaQ in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_00160Pca operon transcriptional activator PcaQ (134 aa)    
Predicted Functional Partners:
RB2654_00210
Uncharacterized protein (464 aa)
   
          0.714
RB2654_15195
Uncharacterized protein (934 aa)
   
          0.704
RB2654_00275
Acyl-CoA synthase (471 aa)
   
          0.683
RB2654_00165
Transposase (169 aa)
              0.657
RB2654_08112
Uncharacterized protein (431 aa)
   
          0.592
RB2654_16531
Uncharacterized protein (405 aa)
   
          0.586
RB2654_22963
T-DNA border endonuclease (782 aa)
   
          0.558
RB2654_00045
Uncharacterized protein (412 aa)
   
          0.547
RB2654_00125
Acetolactate synthase large subunit (475 aa)
   
          0.546
RB2654_22153
Uncharacterized protein (157 aa)
   
          0.538
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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