STRINGSTRING
RB2654_00270 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_00270" - Transcriptional regulator-like in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_00270Transcriptional regulator-like (248 aa)    
Predicted Functional Partners:
RB2654_08267
Transcriptional regulator, GntR family protein (213 aa)
   
   
  0.781
RB2654_07209
Transcriptional regulatory protein (247 aa)
   
   
  0.771
RB2654_13194
Uncharacterized protein (241 aa)
   
   
  0.765
RB2654_12709
Uncharacterized protein (219 aa)
   
          0.765
RB2654_06949
Transcriptional regulator (228 aa)
   
          0.763
RB2654_07174
Uncharacterized protein (223 aa)
   
          0.759
RB2654_00265
Putative acyl-CoA synthase (256 aa)
         
  0.702
RB2654_20648
Transcriptional regulator, GntR family protein (218 aa)
   
          0.696
RB2654_10698
Transcriptional regulator, GntR family protein (221 aa)
   
          0.661
RB2654_23243
D-lactate dehydrogenase ; First component of the membrane-bound D-lactate oxidase, which is believed to play an important role in the energization of the active transport of a variety of sugars and amino acids (576 aa)
   
 
    0.607
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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