STRINGSTRING
RB2654_00275 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_00275" - Acyl-CoA synthase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_00275Acyl-CoA synthase (471 aa)    
Predicted Functional Partners:
RB2654_15195
Uncharacterized protein (934 aa)
   
          0.778
RB2654_00045
Uncharacterized protein (412 aa)
   
          0.777
RB2654_22928
Putative transcriptional regulator (124 aa)
   
          0.766
RB2654_22963
T-DNA border endonuclease (782 aa)
   
          0.764
RB2654_22153
Uncharacterized protein (157 aa)
   
          0.762
RB2654_00035
Transcriptional regulator, LysR family protein (329 aa)
   
          0.750
RB2654_22953
DNA-binding protein (239 aa)
   
          0.747
RB2654_08112
Uncharacterized protein (431 aa)
   
          0.738
RB2654_00055
Putative ferredoxin (110 aa)
   
          0.715
RB2654_16531
Uncharacterized protein (405 aa)
   
          0.714
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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