STRINGSTRING
RB2654_00340 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_00340" - Transposase orfB in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_00340Transposase orfB (55 aa)    
Predicted Functional Partners:
RB2654_00330
Transposase orfB (238 aa)
          0.940
RB2654_00345
Transposase IS3/IS911-family, orfA (92 aa)
 
          0.906
RB2654_23163
Transposase orfB (103 aa)
 
          0.869
RB2654_17041
Probable coenzyme A ligase (908 aa)
       
    0.685
RB2654_00350
Uncharacterized protein (37 aa)
              0.453
RB2654_01455
Uncharacterized protein (339 aa)
   
          0.431
RB2654_19208
Rhodanese-like protein (200 aa)
   
          0.426
RB2654_11533
Rhodanese-like protein (209 aa)
   
          0.411
RB2654_00325
Universal stress protein family domain protein (274 aa)
         
  0.407
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (526 aa)
       
    0.403
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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