STRINGSTRING
RB2654_00505 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_00505" - VirB8 type IV secretion protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_00505VirB8 type IV secretion protein (188 aa)    
Predicted Functional Partners:
RB2654_00515
Type IV secretion system protein B10, putative (475 aa)
 
     
  0.983
RB2654_00510
Conjugal transfer protein, trbG (240 aa)
 
     
  0.980
RB2654_00475
Type IV secretion system protein B4, putative (792 aa)
 
     
  0.940
RB2654_00520
Type IV secretion system protein B11, putative (306 aa)
 
     
  0.912
RB2654_22458
Type IV secretion system protein B4, putative (776 aa)
 
     
  0.908
RB2654_23038
Type IV secretion system protein B4, putative (794 aa)
 
     
  0.907
RB2654_00500
Vir-like protein (337 aa)
 
          0.899
RB2654_22488
Conjugal transfer protein (459 aa)
 
     
  0.898
RB2654_23008
Conjugal transfer protein (441 aa)
 
     
  0.889
RB2654_00540
Type IV secretion system coupling protein (640 aa)
 
     
  0.883
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]