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RB2654_01130 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_01130" - Pseudouridine synthase in Maritimibacter alkaliphilus
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
RB2654_01130Pseudouridine synthase (181 aa)    
Predicted Functional Partners:
der
GTP-binding protein EngA ; GTPase that plays an essential role in the late steps of ribosome biogenesis (481 aa)
 
   
  0.632
RB2654_10633
Methyltransferase, putative (187 aa)
   
        0.623
RB2654_05460
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (344 aa)
 
 
  0.606
ligA
Polydeoxyribonucleotide synthase [NAD(+)] ; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (710 aa)
     
    0.593
RB2654_18313
30S ribosomal protein S1 ; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (554 aa)
   
      0.587
RB2654_03919
Inosine-5’-monophosphate dehydrogenase (484 aa)
   
        0.569
RB2654_20253
Uncharacterized protein (320 aa)
   
        0.565
rlmN
tRNA m2A37 methyltransferase ; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity (394 aa)
   
      0.560
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (301 aa)
   
   
  0.559
RB2654_00860
Recombination protein N ; May be involved in recombinational repair of damaged DNA (550 aa)
 
        0.552
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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