STRINGSTRING
RB2654_01645 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_01645" - Regulatory protein SoxS in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_01645Regulatory protein SoxS (124 aa)    
Predicted Functional Partners:
RB2654_01655
Thioredoxin SoxW (195 aa)
 
          0.931
RB2654_01635
YeeE/YedE family protein (353 aa)
 
          0.901
RB2654_01660
Monoheme cytochrome c SoxX (155 aa)
 
          0.866
RB2654_01665
Sulfur oxidation protein SoxY (138 aa)
 
          0.854
RB2654_01670
Sulfur oxidation Z protein (79 aa)
 
          0.837
RB2654_01675
Thiosulfate-oxidizing multienzyme system protein SoxA (283 aa)
 
          0.832
RB2654_01685
Sulfur oxidation molybdopterin C protein (425 aa)
 
          0.812
RB2654_01690
Diheme cytochrome c SoxD (354 aa)
 
          0.807
RB2654_01680
Sulfur oxidation B protein (565 aa)
 
          0.800
RB2654_19053
YeeE/YedE family protein (354 aa)
 
          0.789
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]