STRINGSTRING
RB2654_02114 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_02114" - Putative pre-16S rRNA nuclease in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_02114Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (155 aa)    
Predicted Functional Partners:
RB2654_02119
Putative cytochrome c-type biogenesis protein, cycH (411 aa)
              0.897
RB2654_02109
Uncharacterized protein (74 aa)
              0.880
RB2654_02124
Uncharacterized protein (28 aa)
              0.648
RB2654_21278
Single-stranded-DNA-specific exonuclease RecJ (582 aa)
 
      0.604
RB2654_02129
Sarcosine oxidase, beta subunit family protein (415 aa)
              0.591
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (213 aa)
 
        0.590
RB2654_17426
UPF0301 protein RB2654_17426 (191 aa)
   
   
  0.583
RB2654_01390
Metallo-beta-lactamase family protein (554 aa)
 
          0.579
RB2654_17476
Dihydroorotase (420 aa)
 
        0.554
RB2654_10518
Aspartyl-tRNA synthetase (592 aa)
 
          0.552
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (6%) [HD]