STRINGSTRING
RB2654_02484 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_02484" - Transcriptional regulator SkgA in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_02484Transcriptional regulator SkgA (251 aa)    
Predicted Functional Partners:
RB2654_06202
Putative glutamine synthetase-like protein (481 aa)
 
 
  0.800
RB2654_20623
Glutamine synthetase protein-like protein (451 aa)
   
 
  0.708
RB2654_05837
Glutamine synthetase family protein (453 aa)
   
 
  0.708
RB2654_02319
Glutamine synthetase (468 aa)
   
 
  0.708
RB2654_02479
Uncharacterized protein (169 aa)
 
          0.689
pheT
Phenylalanyl-tRNA synthetase beta subunit (808 aa)
         
  0.656
RB2654_00940
DnaJ domain protein (209 aa)
   
 
  0.597
himD
Integration host factor subunit beta ; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (93 aa)
     
 
  0.522
RB2654_14655
DNA-binding protein HU (95 aa)
     
 
  0.522
himA
Integration host factor subunit alpha ; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (110 aa)
     
 
  0.522
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (6%) [HD]