STRINGSTRING
RB2654_02584 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_02584" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_02584Uncharacterized protein (302 aa)    
Predicted Functional Partners:
fumC
Fumarate hydratase class II (464 aa)
              0.564
RB2654_20888
Malonate transporter, putative (309 aa)
   
          0.546
RB2654_20818
NAD dependent malic enzyme (761 aa)
         
  0.517
RB2654_13579
Phosphate acetyltransferase (752 aa)
         
  0.517
RB2654_02594
Uncharacterized protein (184 aa)
              0.446
RB2654_19343
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region-D-isomer specific 2-hydroxyacid dehydrogenase (301 aa)
              0.435
RB2654_16996
D-isomer specific 2-hydroxyacid dehydrogenase family protein (316 aa)
              0.435
RB2654_08857
2-hydroxyacid dehydrogenase (315 aa)
              0.435
RB2654_02114
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (155 aa)
              0.435
RB2654_15641
Auxin efflux carrier family protein (300 aa)
   
          0.427
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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