STRINGSTRING
RB2654_03144 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03144" - Exodeoxyribonuclease III in Maritimibacter alkaliphilus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Databases
Textmining
[Homology]
Score
RB2654_03144Exodeoxyribonuclease III (267 aa)    
Predicted Functional Partners:
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (210 aa)
 
 
  0.953
RB2654_15589
Exodeoxyribonuclease III, putative (262 aa)
   
   
 
0.872
RB2654_03139
Inosine-uridine preferring nucleoside hydrolase (314 aa)
              0.859
RB2654_15529
A/G-specific adenine glycosylase (349 aa)
     
  0.855
RB2654_12884
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
     
  0.852
RB2654_10393
DNA polymerase I (932 aa)
     
  0.834
RB2654_01790
DNA-3-methyladenine glycosylase II, putative (210 aa)
   
  0.808
RB2654_03134
UPF0061 protein RB2654_03134 (470 aa)
              0.801
RB2654_03149
Uncharacterized protein (388 aa)
              0.643
argS
Arginyl-tRNA synthetase (572 aa)
   
   
  0.641
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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