STRINGSTRING
RB2654_03224 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03224" - Nitrogen regulation protein ntrY in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_03224Nitrogen regulation protein ntrY (728 aa)    
Predicted Functional Partners:
RB2654_03229
Nitrogen assimilation regulatory protein NtrX (478 aa)
 
 
  0.999
RB2654_03219
Nitrogen metabolism transcriptional regulator, NtrC (453 aa)
 
 
  0.973
RB2654_02100
C4-dicarboxylate transport transcriptional regulatory protein DctD (439 aa)
 
 
  0.940
RB2654_12384
C4-dicarboxylate transport transcriptional regulatory protein (408 aa)
 
 
  0.918
RB2654_20783
Two component, sigma54 specific, transcriptional regulator, fis family protein (468 aa)
 
 
  0.878
RB2654_03239
Potassium uptake transporter, transmembrane subunit, TrkH (508 aa)
              0.748
RB2654_03214
Nitrogen regulation protein, NtrB signal transduction histidine kinase (355 aa)
 
     
0.734
RB2654_15265
NADH-ubiquinone oxidoreductase (322 aa)
   
          0.721
RB2654_03234
Trk system potassium uptake protein TrkA (458 aa)
              0.720
hflX
GTP-binding protein HflX ; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (427 aa)
 
          0.703
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (8%) [HD]