STRINGSTRING
RB2654_03254 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03254" - Penicillin amidase family protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_03254Penicillin amidase family protein (827 aa)    
Predicted Functional Partners:
RB2654_03259
Putative 3-hydroxyisobutyrate dehydrogenase (287 aa)
              0.723
RB2654_13454
Transcriptional regulator, MarR family protein (148 aa)
   
          0.635
RB2654_15494
Uncharacterized protein (217 aa)
   
          0.583
RB2654_13625
NUDIX hydrolase (87 aa)
   
          0.496
RB2654_16831
Acetyltransferase, GNAT family protein (231 aa)
   
          0.482
RB2654_15405
Transcriptional regulator PetP (83 aa)
   
          0.479
RB2654_13655
Putative membrane protein (147 aa)
   
          0.467
RB2654_00755
Uncharacterized protein (129 aa)
   
          0.465
RB2654_03269
Uncharacterized protein (201 aa)
              0.464
RB2654_03264
Uncharacterized protein (194 aa)
              0.464
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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