STRINGSTRING
RB2654_03419 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03419" - N-acetylmuramoyl-L-alanine amidase, family 3 in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_03419N-acetylmuramoyl-L-alanine amidase, family 3 (416 aa)    
Predicted Functional Partners:
RB2654_04919
Beta-N-acetylhexosaminidase (334 aa)
   
 
  0.916
RB2654_16606
Beta-N-acetylglucosaminidase (154 aa)
         
    0.900
RB2654_10678
Glycosyl transferase, family 51 (733 aa)
   
 
  0.727
RB2654_03414
Aminotransferase, classes I and II (379 aa)
         
  0.710
RB2654_02329
Nicotinamide nucleotide repair protein ; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (546 aa)
   
   
  0.685
RB2654_18943
Putative MrcB penicillin binding protein B (727 aa)
   
 
  0.685
RB2654_03429
Penicillin-binding protein 1A (838 aa)
 
 
      0.683
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (208 aa)
 
     
  0.654
murE
UDP-N-acetylmuramyl-tripeptide synthetase (495 aa)
 
 
  0.644
murI
Glutamate racemase ; Provides the (R)-glutamate required for cell wall biosynthesis (270 aa)
 
 
 
  0.632
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (6%) [HD]