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rne protein (Maritimibacter alkaliphilus) - STRING interaction network
"rne" - Ribonuclease E in Maritimibacter alkaliphilus
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rneRibonuclease E ; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (958 aa)    
Predicted Functional Partners:
eno
2-phosphoglycerate dehydratase ; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (424 aa)
     
 
  0.897
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (716 aa)
   
 
  0.850
bamD
Outer membrane protein assembly factor BamD ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (297 aa)
 
          0.602
RB2654_18498
Rod shape-determining protein MreD (379 aa)
 
 
 
  0.601
RB2654_00760
Penicillin-binding protein (596 aa)
 
     
  0.593
RB2654_09079
Acetyltransferase, GNAT family protein (893 aa)
     
 
  0.566
RB2654_18478
Rod shape-determining protein MreB (334 aa)
   
 
  0.564
RB2654_18493
Penicillin-binding protein 2 (647 aa)
 
     
  0.562
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (208 aa)
     
 
  0.551
murE
UDP-N-acetylmuramyl-tripeptide synthetase (495 aa)
 
      0.549
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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