STRINGSTRING
RB2654_04249 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_04249" - Cytochrome c-554 in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_04249Cytochrome c-554 (157 aa)    
Predicted Functional Partners:
RB2654_04254
Diheme class I cytochrome c (295 aa)
 
     
  0.857
RB2654_04244
Transcriptional regulator, LysR family protein (303 aa)
              0.656
RB2654_10983
Possible LuxR family protein (197 aa)
   
          0.545
RB2654_16961
Cytochrome c (146 aa)
   
          0.542
RB2654_12144
Uncharacterized protein (172 aa)
   
          0.469
RB2654_20833
Adenosine deaminase (335 aa)
   
          0.447
RB2654_13289
Glycosyltransferase 2 (408 aa)
   
          0.447
RB2654_11448
Uncharacterized protein (104 aa)
   
          0.435
RB2654_20053
Possible LuxR family protein (203 aa)
   
          0.431
RB2654_05245
Uncharacterized protein (119 aa)
   
          0.424
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (15%) [HD]