STRINGSTRING
RB2654_04254 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_04254" - Diheme class I cytochrome c in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_04254Diheme class I cytochrome c (295 aa)    
Predicted Functional Partners:
RB2654_04686
Putative carbon monoxide dehydrogenase medium chain (260 aa)
   
  0.918
RB2654_02779
Carbon monoxide dehydrogenase chain C (265 aa)
   
  0.918
RB2654_04696
Carbon-monoxide dehydrogenase, small subunit (156 aa)
 
  0.914
RB2654_02784
Carbon-monoxide dehydrogenase small subunit (165 aa)
 
  0.914
RB2654_06309
Putative aldehyde dehydrogenase subunit protein (153 aa)
 
  0.912
RB2654_01090
Isoquinoline 1-oxidoreductase, alpha subunit (154 aa)
 
  0.912
RB2654_04249
Cytochrome c-554 (157 aa)
 
     
  0.857
RB2654_17041
Probable coenzyme A ligase (908 aa)
       
  0.855
RB2654_17796
Carbon monoxide dehydrogenase operon G protein (175 aa)
 
 
    0.675
RB2654_17911
Putative membrane protein (405 aa)
     
      0.661
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (8%) [HD]