STRINGSTRING
RB2654_04289 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_04289" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_04289Uncharacterized protein (215 aa)    
Predicted Functional Partners:
RB2654_19858
Uncharacterized protein (260 aa)
   
          0.712
RB2654_17631
Uncharacterized protein (930 aa)
   
          0.682
RB2654_16251
Uncharacterized protein (191 aa)
   
          0.682
RB2654_13004
Putative S-adenosyl L-homocysteine hydrolase (187 aa)
   
          0.682
RB2654_08467
DNA-binding protein, putative (104 aa)
   
          0.674
RB2654_04899
2’-deoxycytidine 5’-triphosphate deaminase (364 aa)
   
          0.671
prfA
Peptide chain release factor 1 ; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (351 aa)
              0.624
prmC
Protein-glutamine N-methyltransferase PrmC ; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (279 aa)
              0.624
RB2654_03184
DNA polymerase III subunit chi (149 aa)
   
          0.618
RB2654_16381
DNA-binding protein, putative (120 aa)
   
          0.611
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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