STRINGSTRING
RB2654_04501 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_04501" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_04501Uncharacterized protein (128 aa)    
Predicted Functional Partners:
RB2654_04506
Thiamine-phosphate pyrophosphorylase, putative (206 aa)
              0.684
trmJ
tRNA Cm32/Um32 methyltransferase ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (249 aa)
              0.674
RB2654_16736
Uncharacterized protein (129 aa)
   
          0.513
RB2654_19088
Uncharacterized protein (167 aa)
   
          0.504
RB2654_11638
Uncharacterized protein (156 aa)
   
          0.461
RB2654_23263
Putative membrane protein (173 aa)
   
          0.448
RB2654_07381
Adenylate/guanylate cyclase/hydrolase, alpha/beta fold family protein (393 aa)
   
          0.420
RB2654_23558
Alpha/beta hydrolase fold protein (289 aa)
   
          0.405
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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