STRINGSTRING
RB2654_04616 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_04616" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_04616Uncharacterized protein (138 aa)    
Predicted Functional Partners:
RB2654_17561
Oxidoreductase, short chain dehydrogenase/reductase family protein (309 aa)
   
          0.689
RB2654_17541
Acyl-CoA dehydrogenase family protein (395 aa)
   
          0.649
RB2654_17546
Acyl-CoA dehydrogenase, putative (368 aa)
   
          0.636
tig
PPIase ; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (448 aa)
              0.616
RB2654_21593
Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic-binding protein (391 aa)
   
          0.509
RB2654_20413
Uncharacterized protein (271 aa)
   
          0.477
RB2654_18698
Uncharacterized protein (270 aa)
   
          0.456
RB2654_01610
Uncharacterized protein (171 aa)
              0.435
RB2654_18388
6-aminohexanoate-dimer hydrolase, putative (389 aa)
   
          0.424
RB2654_20363
Transcriptional regulator, TetR family protein (217 aa)
   
          0.407
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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