STRINGSTRING
RB2654_05450 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_05450" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_05450Uncharacterized protein (328 aa)    
Predicted Functional Partners:
RB2654_19533
Uncharacterized protein (627 aa)
   
 
  0.797
RB2654_05445
Uncharacterized protein (110 aa)
 
          0.791
RB2654_23613
Uncharacterized protein (267 aa)
   
 
  0.779
RB2654_23388
Uncharacterized protein (267 aa)
   
 
  0.779
RB2654_05842
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (407 aa)
 
 
  0.714
RB2654_01180
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (397 aa)
   
 
  0.701
rpoH
RNA polymerase sigma-32 factor (298 aa)
   
        0.679
RB2654_10883
UDP-glucose 6-dehydrogenase (440 aa)
   
 
    0.621
RB2654_00810
Oxidoreductase (278 aa)
 
 
  0.613
RB2654_19988
Smp-30/Cgr1 family protein (280 aa)
 
 
  0.540
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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