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tolB protein (Maritimibacter alkaliphilus) - STRING interaction network
"tolB" - Protein TolB in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBProtein TolB ; Involved in the TonB-independent uptake of proteins (444 aa)    
Predicted Functional Partners:
RB2654_05637
OmpA/MotB family protein (165 aa)
 
 
  0.998
RB2654_05657
Proton transporter TolQ (231 aa)
 
 
  0.987
RB2654_05652
Biopolymer transport protein, ExbD/TolR family protein (134 aa)
 
   
  0.979
RB2654_21373
OmpA family protein (222 aa)
 
 
  0.935
RB2654_16821
OmpA domain protein (315 aa)
 
 
  0.887
RB2654_05647
TonB domain protein, putative (360 aa)
              0.872
RB2654_18238
OmpA family protein (142 aa)
   
 
  0.871
RB2654_10349
OmpA family protein (225 aa)
   
 
  0.871
RB2654_10254
OmpA domain protein (797 aa)
   
 
  0.871
RB2654_04681
Outer membrane protein, OmpA/MotB family protein (647 aa)
   
 
  0.871
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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