STRINGSTRING
RB2654_05672 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_05672" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_05672Uncharacterized protein (206 aa)    
Predicted Functional Partners:
RB2654_05667
RNA 2’,3’-cyclic phosphodiesterase ; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (181 aa)
              0.860
RB2654_05662
Putative thioesterase (129 aa)
              0.827
RB2654_20848
Uncharacterized protein (339 aa)
   
          0.776
RB2654_10249
Uncharacterized protein (108 aa)
   
          0.775
RB2654_00940
DnaJ domain protein (209 aa)
   
          0.774
RB2654_00950
Uncharacterized protein (141 aa)
   
          0.764
RB2654_07711
Possible flagellar switch protein FliM (378 aa)
   
          0.760
RB2654_08957
Rhomboid family protein (230 aa)
   
          0.756
RB2654_03984
Uncharacterized protein (164 aa)
   
          0.754
RB2654_05410
Uncharacterized protein (147 aa)
   
          0.753
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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