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RB2654_05877 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_05877" - Polyhydroxyalkanoate depolymerase, intracellular in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_05877Polyhydroxyalkanoate depolymerase, intracellular (431 aa)    
Predicted Functional Partners:
RB2654_05872
Poly-beta-hydroxybutyrate polymerase (598 aa)
 
   
  0.988
RB2654_05862
Uncharacterized protein (186 aa)
 
     
  0.843
RB2654_05867
Phasin, PhaP (147 aa)
 
          0.759
RB2654_16036
Acetoacetyl-CoA reductase (240 aa)
 
     
  0.720
RB2654_11894
Uncharacterized protein (318 aa)
   
          0.491
RB2654_17296
Putative membrane protein (181 aa)
   
          0.464
RB2654_10578
Uncharacterized protein (85 aa)
   
          0.438
RB2654_10703
Zinc metallopeptidase-like protein (267 aa)
              0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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