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RB2654_05972 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_05972" - DNA-binding protein, putative in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_05972DNA-binding protein, putative (129 aa)    
Predicted Functional Partners:
RB2654_05967
TPR repeat family protein (86 aa)
              0.865
RB2654_05977
Aspartate aminotransferase (400 aa)
              0.669
RB2654_05962
Transcriptional regulator, MarR family protein (165 aa)
              0.637
RB2654_01595
Uncharacterized protein (461 aa)
   
          0.630
RB2654_03949
Uncharacterized protein (417 aa)
   
          0.598
RB2654_08232
Uncharacterized protein (183 aa)
   
          0.590
RB2654_02274
Uncharacterized protein (145 aa)
   
          0.576
RB2654_03564
Putative trimethylamine methyltransferase protein (518 aa)
   
          0.568
RB2654_03464
Uncharacterized protein (154 aa)
   
          0.557
RB2654_05410
Uncharacterized protein (147 aa)
   
          0.546
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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