STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12702.1COG2124 Cytochrome P450. (408 aa)    
Predicted Functional Partners:
EAQ11208.1
Coenzyme a synthetase-like protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.999
EAQ11891.1
Fatty acid synthase transmembrane protein; COG3321 Polyketide synthase modules and related proteins.
 
 0.963
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.902
EAQ12703.1
Hypothetical protein; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
 
     0.806
EAQ13833.1
Hypothetical protein.
  
 0.802
EAQ12709.1
Phenylacetic acid degradation oxidoreductase PaaK; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 0.797
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.762
EAQ10540.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 0.760
EAQ10827.1
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 0.759
EAQ11795.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 0.756
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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