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RB2654_06544 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_06544" - Gentisate 1,2-dioxygenase in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_06544Gentisate 1,2-dioxygenase (344 aa)    
Predicted Functional Partners:
RB2654_03929
Salicylate hydroxylase (388 aa)
 
   
  0.976
RB2654_06539
Fumarylacetoacetate hydrolase family protein (232 aa)
 
   
  0.935
RB2654_06394
Maleylacetoacetate isomerase (205 aa)
 
  0.879
RB2654_06549
Transcriptional regulatory protein (153 aa)
              0.653
RB2654_16371
Glutathione S-transferase family protein (244 aa)
   
          0.622
RB2654_06534
Cardiolipin synthase-like protein (612 aa)
              0.609
RB2654_21748
Indolepyruvate ferredoxin oxidoreductase (516 aa)
 
          0.533
RB2654_06564
Uncharacterized protein (247 aa)
              0.509
RB2654_06559
Uncharacterized protein (343 aa)
              0.509
RB2654_06554
Glycosyltransferase (615 aa)
              0.509
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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