STRINGSTRING
RB2654_06949 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_06949" - Transcriptional regulator in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_06949Transcriptional regulator (228 aa)    
Predicted Functional Partners:
RB2654_06954
Uncharacterized protein (386 aa)
              0.859
RB2654_07209
Transcriptional regulatory protein (247 aa)
   
          0.778
RB2654_07174
Uncharacterized protein (223 aa)
   
          0.776
RB2654_00270
Transcriptional regulator-like (248 aa)
   
          0.763
RB2654_21288
Regulatory protein GntR, HTH-GntR, C-terminal (233 aa)
   
          0.738
RB2654_23238
Pyruvate dehydrogenase complex repressor (259 aa)
   
          0.696
RB2654_06909
Uncharacterized protein (114 aa)
              0.682
RB2654_06904
Uncharacterized protein (352 aa)
              0.682
RB2654_06944
Uncharacterized protein (538 aa)
              0.674
RB2654_06939
Dipeptide transport system permease protein dppB (336 aa)
              0.663
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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