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RB2654_06979 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_06979" - Transcriptional regulatory protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_06979Transcriptional regulatory protein (174 aa)    
Predicted Functional Partners:
RB2654_22703
Transcriptional regulatory protein (123 aa)
   
          0.683
RB2654_06989
Putative branched-chain amino acid uptake ABC transporter ATP-binding protein (249 aa)
              0.647
RB2654_06999
Uncharacterized protein (287 aa)
              0.646
RB2654_06994
Branched-chain amino acid ABC transporter, permease protein (317 aa)
              0.646
RB2654_06984
Uncharacterized protein (237 aa)
              0.646
RB2654_22068
Uncharacterized protein (183 aa)
 
     
  0.613
RB2654_07004
Putative amino acid uptake ABC transporter solute-binding protein, LeuIle/Val-binding protein family protein (389 aa)
   
        0.525
RB2654_08237
Lincomycin resistance protein lmrb (492 aa)
         
  0.456
RB2654_06127
Putative multidrug-efflux transporter (497 aa)
         
  0.456
RB2654_21108
Two component transcriptional regulator, LuxR family protein (215 aa)
     
 
  0.452
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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