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RB2654_07029 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_07029" - Transcriptional regulator, TetR family protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_07029Transcriptional regulator, TetR family protein (208 aa)    
Predicted Functional Partners:
RB2654_21603
Uncharacterized protein (128 aa)
   
          0.655
RB2654_07024
TrapT family, DctM subunit, C4-dicarboxylate transport (490 aa)
              0.653
RB2654_07019
Uncharacterized protein (191 aa)
              0.653
RB2654_23563
Probable secreted glycosyl hydrolase (247 aa)
   
          0.609
RB2654_23598
Uncharacterized protein (185 aa)
   
          0.585
RB2654_23593
Thiolase (382 aa)
   
          0.580
RB2654_21608
Acetyl-CoA acetyltransferase (383 aa)
   
          0.557
RB2654_05792
Uncharacterized protein (468 aa)
   
          0.507
RB2654_23573
Uncharacterized protein (428 aa)
   
          0.488
RB2654_07014
Uncharacterized protein (394 aa)
              0.485
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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