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RB2654_07224 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_07224" - Sugar ABC transporter, periplasmic sugar-binding protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_07224Sugar ABC transporter, periplasmic sugar-binding protein (396 aa)    
Predicted Functional Partners:
RB2654_07214
Ribose ABC transporter, permease protein (333 aa)
 
   
    0.980
RB2654_07219
Ribose ABC transporter, ATP-binding protein (544 aa)
 
   
    0.964
RB2654_01855
Possible transcriptional regulator, TetR family protein (206 aa)
   
          0.746
RB2654_22288
Uncharacterized protein (162 aa)
   
          0.704
RB2654_00630
Replication protein a (432 aa)
   
          0.663
RB2654_07229
Transcriptional regulator (344 aa)
 
          0.650
RB2654_14390
Uncharacterized protein (207 aa)
   
          0.592
RB2654_12524
DoxD-like family protein (134 aa)
   
          0.543
RB2654_07316
Ribose ABC transporter (Permease) (316 aa)
 
   
    0.541
RB2654_07311
Ribose ABC transporter (333 aa)
 
   
    0.531
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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