STRINGSTRING
RB2654_07561 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_07561" - OpgC protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_07561OpgC protein (392 aa)    
Predicted Functional Partners:
RB2654_07556
Glycosyl transferase, family 2 (598 aa)
 
          0.911
RB2654_07546
Periplasmic glucan biosynthesis protein ; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) (536 aa)
 
          0.886
RB2654_07551
Uncharacterized protein (58 aa)
              0.822
RB2654_07566
Uncharacterized protein (122 aa)
              0.621
RB2654_17916
Uncharacterized protein (244 aa)
   
          0.567
RB2654_10563
Uncharacterized protein (232 aa)
   
          0.506
RB2654_07541
Putative atp-binding abc transporter protein (365 aa)
              0.487
RB2654_07536
ABC-type sugar transport system, permease component (297 aa)
              0.487
RB2654_07531
Binding-protein-dependent transport systems inner membrane component (291 aa)
              0.487
RB2654_17626
Uncharacterized protein (689 aa)
   
          0.473
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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