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RB2654_07786 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_07786" - RNA polymerase sigma factor in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_07786RNA polymerase sigma factor (185 aa)    
Predicted Functional Partners:
RB2654_07781
Uncharacterized protein (123 aa)
              0.865
RB2654_07776
Uncharacterized protein (124 aa)
              0.859
RB2654_21068
RNA polymerase sigma-70 factor (195 aa)
   
          0.698
RB2654_13785
Transcriptional activator, putative (216 aa)
     
 
  0.684
RB2654_07796
AMP-binding enzyme (499 aa)
         
  0.660
RB2654_07791
3-hydroxybutyrate dehydrogenase, putative (267 aa)
              0.657
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1415 aa)
       
 
  0.587
RB2654_11793
RNA polymerase sigma factor (185 aa)
   
          0.576
RB2654_13790
RNA polymerase sigma factor (172 aa)
   
          0.562
RB2654_03909
Multisensor hybrid histidine kinase (800 aa)
     
 
  0.551
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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