STRINGSTRING
RB2654_08442 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_08442" - Possible Endonuclease/Exonuclease/phosphatase fa in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_08442Possible Endonuclease/Exonuclease/phosphatase fa (343 aa)    
Predicted Functional Partners:
RB2654_08447
Putative heat shock protein DnaJ (226 aa)
              0.880
RB2654_12639
Membrane protein, putative (255 aa)
   
          0.777
RB2654_08092
Lipoprotein, putative (171 aa)
   
          0.777
RB2654_01320
Lipoprotein, putative (140 aa)
   
          0.777
RB2654_03949
Uncharacterized protein (417 aa)
   
          0.776
RB2654_21078
Uncharacterized protein (174 aa)
   
          0.775
RB2654_19733
Peptidoglycan binding domain protein (584 aa)
   
          0.775
RB2654_13339
Possible TolA protein (426 aa)
   
          0.775
RB2654_01595
Uncharacterized protein (461 aa)
   
          0.773
RB2654_05982
Uncharacterized protein (134 aa)
   
          0.771
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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