STRINGSTRING
RB2654_08752 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_08752" - Protease PrtA in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_08752Protease PrtA (415 aa)    
Predicted Functional Partners:
RB2654_10673
Type I secretion system ATPase (582 aa)
 
   
  0.885
RB2654_10668
Type I secretion membrane fusion protein, HlyD family protein (461 aa)
 
     
  0.867
RB2654_18011
HlyD family secretion protein (435 aa)
 
     
  0.822
RB2654_12339
Probable HlyD family secretion protein (389 aa)
 
     
  0.821
RB2654_18006
ABC transporter HlyB/MsbA family protein (712 aa)
 
     
  0.764
RB2654_12344
Probable ATP-binding/permease fusion ABC transporter (747 aa)
 
     
  0.742
RB2654_10713
Uncharacterized protein (1435 aa)
   
          0.714
RB2654_06724
Uncharacterized protein (1419 aa)
   
          0.704
RB2654_06439
Uncharacterized protein (1435 aa)
   
          0.692
RB2654_01080
Type I secretion target repeat protein (808 aa)
   
          0.662
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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