STRINGSTRING
RB2654_08802 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_08802" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_08802Uncharacterized protein (266 aa)    
Predicted Functional Partners:
RB2654_08812
TrkA-C domain protein (593 aa)
              0.666
RB2654_08807
Uncharacterized protein (390 aa)
              0.666
RB2654_08817
Transporter, LysE family protein (197 aa)
              0.585
RB2654_19108
Uncharacterized protein (150 aa)
   
          0.581
RB2654_00955
Uncharacterized protein (158 aa)
   
          0.559
RB2654_20413
Uncharacterized protein (271 aa)
   
          0.505
RB2654_01430
Uncharacterized protein (209 aa)
   
          0.503
RB2654_10009
Aminoglycoside 6’-N-acetyltransferase (169 aa)
   
          0.465
RB2654_08822
Transcriptional regulator, AsnC family protein (147 aa)
              0.452
RB2654_16056
Uncharacterized protein (72 aa)
   
          0.437
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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