STRINGSTRING
RB2654_09889 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_09889" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_09889Uncharacterized protein (307 aa)    
Predicted Functional Partners:
RB2654_07711
Possible flagellar switch protein FliM (378 aa)
   
          0.650
RB2654_09894
Uncharacterized protein (345 aa)
              0.614
RB2654_09904
DNA-binding response regulator (242 aa)
              0.612
RB2654_09899
Histidine kinase (461 aa)
              0.612
RB2654_09044
Uncharacterized protein (112 aa)
   
          0.584
RB2654_22788
Replication initiator RepC (351 aa)
   
          0.573
RB2654_15781
Heme acquisition protein hasR (672 aa)
   
          0.567
RB2654_08772
Uncharacterized protein (128 aa)
   
          0.562
RB2654_22538
T-DNA border endonuclease (777 aa)
   
          0.518
RB2654_07386
Lipoprotein, putative (296 aa)
   
          0.478
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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