STRINGSTRING
RB2654_10094 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_10094" - Prephenate dehydratase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_10094Prephenate dehydratase (279 aa)    
Predicted Functional Partners:
RB2654_18758
Chorismate mutase (109 aa)
   
  0.991
RB2654_17386
Aspartate aminotransferase (394 aa)
   
 
  0.985
RB2654_08302
Prephenate dehydrogenase (308 aa)
 
 
  0.958
RB2654_05977
Aspartate aminotransferase (400 aa)
 
 
  0.956
hisC
Imidazole acetol-phosphate transaminase (367 aa)
   
  0.941
RB2654_08047
Histidinol-phosphate aminotransferase (369 aa)
   
  0.929
RB2654_14535
Chorismate synthase (94 aa)
 
 
  0.868
katG
Peroxidase/catalase ; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (730 aa)
         
  0.840
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (441 aa)
   
 
  0.814
RB2654_03414
Aminotransferase, classes I and II (379 aa)
 
 
  0.783
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (6%) [HD]