STRINGSTRING
RB2654_10199 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_10199" - Transport permease protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_10199Transport permease protein (253 aa)    
Predicted Functional Partners:
RB2654_10194
ABC multidrug/carbohydrate efflux transporter, ATPase subunit (316 aa)
  0.994
murA
UDP-N-acetylglucosamine enolpyruvyl transferase ; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (421 aa)
            0.816
RB2654_09264
ABC transporter, ATP-binding protein (249 aa)
 
  0.766
RB2654_21148
Efflux ABC transporter, ATP-binding protein (243 aa)
 
  0.751
RB2654_12834
ABC transporter, ATP-binding protein NosF (302 aa)
 
  0.751
RB2654_10214
K+-dependent Na+/Ca+ exchanger related-protein (331 aa)
   
      0.671
RB2654_10204
Peptidase, family S49 (264 aa)
              0.634
RB2654_10209
Uncharacterized protein (52 aa)
              0.628
RB2654_10189
Uncharacterized protein (122 aa)
              0.617
RB2654_10219
Short chain dehydrogenase (242 aa)
   
   
  0.544
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]