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RB2654_10354 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_10354" - ADA regulatory protein in Maritimibacter alkaliphilus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_10354ADA regulatory protein (289 aa)    
Predicted Functional Partners:
rpoD
Sigma-70 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (670 aa)
     
 
  0.762
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (210 aa)
         
  0.739
RB2654_10393
DNA polymerase I (932 aa)
     
 
  0.686
RB2654_10349
OmpA family protein (225 aa)
              0.672
RB2654_01790
DNA-3-methyladenine glycosylase II, putative (210 aa)
 
 
  0.619
RB2654_10359
Uncharacterized protein (211 aa)
              0.616
rpoH
RNA polymerase sigma-32 factor (298 aa)
     
 
  0.562
RB2654_04224
Tyrosine recombinase XerC (315 aa)
 
 
 
  0.557
RB2654_10369
Kinase, pfkB family protein (329 aa)
              0.551
RB2654_13309
Alkylated DNA repair protein, putative (201 aa)
   
   
  0.542
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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