STRINGSTRING
RB2654_10538 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_10538" - Acetyltransferase in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_10538Acetyltransferase (239 aa)    
Predicted Functional Partners:
RB2654_03944
Putative Acetyltransferase (153 aa)
          0.835
rpsD
30S ribosomal protein S4 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (206 aa)
   
      0.713
RB2654_05842
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (407 aa)
   
 
  0.656
RB2654_01180
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (397 aa)
   
 
  0.656
RB2654_14460
Negative transcriptional regulator (206 aa)
 
          0.651
RB2654_10533
Uncharacterized protein (61 aa)
              0.576
RB2654_09079
Acetyltransferase, GNAT family protein (893 aa)
   
 
  0.468
RB2654_09764
Chloramphenicol acetyltransferase, putative (204 aa)
       
    0.463
RB2654_13284
UDP-glucose pyrophosphate (298 aa)
   
        0.439
RB2654_10768
UDPG-pyrophosphorylase (295 aa)
   
        0.439
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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