STRINGSTRING
RB2654_10558 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_10558" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_10558Uncharacterized protein (233 aa)    
Predicted Functional Partners:
RB2654_10568
Nitroreductase family protein (208 aa)
              0.679
RB2654_10563
Uncharacterized protein (232 aa)
              0.679
RB2654_08712
Choline sulfatase (502 aa)
   
          0.640
RB2654_16271
Membrane protein, putative (143 aa)
   
          0.630
RB2654_10573
UPF0235 protein RB2654_10573 (85 aa)
              0.522
RB2654_21523
Diaminopropionate ammonia-lyase (344 aa)
   
          0.520
RB2654_17326
Uncharacterized protein (333 aa)
   
          0.459
RB2654_18588
Uncharacterized protein (188 aa)
   
          0.444
RB2654_02199
Transporter, AcrB/AcrD/AcrF family protein (1272 aa)
   
          0.420
RB2654_12434
TRAP transporter, DctQ subunit (216 aa)
   
          0.418
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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