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RB2654_10813 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_10813" - Transcriptional regulator, TetR family protein in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_10813Transcriptional regulator, TetR family protein (207 aa)    
Predicted Functional Partners:
RB2654_10808
Uncharacterized protein (678 aa)
 
          0.915
RB2654_17621
Uncharacterized protein (285 aa)
   
          0.553
RB2654_18116
DNA binding protein, putative (279 aa)
   
          0.544
RB2654_10798
Possible dioxygenase reductase subunit (361 aa)
 
          0.500
RB2654_09549
Cytochrome c (144 aa)
   
          0.490
RB2654_16681
N-formylglutamate amidohydrolase family protein (246 aa)
   
          0.470
RB2654_10089
Methyltransferase, FkbM family protein (244 aa)
   
          0.462
RB2654_20093
Uncharacterized protein (147 aa)
   
          0.458
RB2654_10803
Putative aromatic-ring hydroxylating dioxygenase, alpha-subunit (412 aa)
 
          0.434
RB2654_10818
Type II DNA modification methyltransferase, putative (228 aa)
              0.429
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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